ViewVC Help
View Directory | Revision Log | Download Tarball | View Changeset | Root Listing
root/owl/trunk
r500
File Last Change
 ../
actionTools/ 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
graphAveraging/ 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
proteinstructure/ 500 (16 years ago) by duarte: New functionality: now we can get sequences and reset tags based on the order the sequences appear on the file.
sadp/ 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
tinker/ 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
tools/ 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
Manifest.txt 493 (16 years ago) by stehr: Changed version number to 0.9
benchmarkGraphAlgorithm.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
calculateGridDensity.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
cnCoarseNbhood.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
cnEvalTargetNbhood.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
cnHashIterNbhood.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
cnex1.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
compareCMs.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
createGraphDb.sh 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
dumpseq.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
genDbGraph.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
genGraph.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
hashIterNbhood.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
iterEvalNbhood.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
iterateNbhood.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
iterateNbs.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
iterateUpperNbhood.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
iterateUpperNbs.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
listInfoGain.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
listInfoLoss.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
make-aglappe.sh 496 (16 years ago) by duarte: Rescued the make-aglappe.sh script from the old trunk
makeNbhTbl.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
maxInfoGain.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
minInfoGain.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
reconstruct.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
rewriteNBHood.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
rewriteNBHood_parallel.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
scoreTargetMoves.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testClusterConnection.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testDeltaDistanceMap.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testGetChains.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testGraph2Pml.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testGraphAverager.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testJUNGframework.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testMySQLConnection.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testPdb.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testPyMol.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testPymolServer.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
testResidueSelectionString.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
writeTargetMoves.java 492 (16 years ago) by duarte: Copied the aglappe-jung branch into trunk.
         40 files shown