 ../
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AA.java
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195
(17 years ago)
by duarte:
Made contactTypes a String[]
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Contact.java
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185
(17 years ago)
by duarte:
Implemented hashCode method in Contact and GenericContact. Was necessary to use these classes as keys in Maps
Fixed bug in equals method in GenericContact
Changed middle character from "\t" to " " in toString
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ContactList.java
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178
(17 years ago)
by duarte:
Fixed bug in getMaxRange method, was not assigning to the max variable
Added toString method to Contact
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EdgeNbh.java
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179
(17 years ago)
by duarte:
FIXED BUG: fixed restrictContactsToMax/MinRange. Couldn't delete contacts at the same time as looping in them
NEW CLASSES NodeNbh and EdgeNbh, now used in getNodeNbh and getEdgeNbh
New method getResidueType
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GenericContact.java
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185
(17 years ago)
by duarte:
Implemented hashCode method in Contact and GenericContact. Was necessary to use these classes as keys in Maps
Fixed bug in equals method in GenericContact
Changed middle character from "\t" to " " in toString
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Graph.java
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192
(17 years ago)
by duarte:
Made contacts public
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GraphIdNotFoundError.java
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172
(17 years ago)
by duarte:
Got rid of some unnecessary warnings
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MsdsdAcCodeNotFoundError.java
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172
(17 years ago)
by duarte:
Got rid of some unnecessary warnings
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MsdsdInconsistentResidueNumbersError.java
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172
(17 years ago)
by duarte:
Got rid of some unnecessary warnings
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MsdsdInfo.java
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190
(17 years ago)
by duarte:
NEW FEATURE: mapping of pdb residue serials and internal serials in the Pdb object
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NbhProbDistribution.java
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183
(17 years ago)
by duarte:
Fixed bug: calculateEntropy was wrong when a pi was 0
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NodeNbh.java
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193
(17 years ago)
by duarte:
Moved motif static methods to Background class. They didn't belong here
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Pdb.java
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190
(17 years ago)
by duarte:
NEW FEATURE: mapping of pdb residue serials and internal serials in the Pdb object
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PdbaseAcCodeNotFoundError.java
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172
(17 years ago)
by duarte:
Got rid of some unnecessary warnings
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PdbaseInconsistencyError.java
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172
(17 years ago)
by duarte:
Got rid of some unnecessary warnings
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PdbaseInfo.java
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190
(17 years ago)
by duarte:
NEW FEATURE: mapping of pdb residue serials and internal serials in the Pdb object
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