[Molvis-list] pdb files of wild type/mutants
Frieda Reichsman
friedar at nsm.umass.edu
Mon May 9 12:48:21 EDT 2005
Thanks to everyone who responded to my query- I now have some very good
resources to work with.
Frieda
Frieda Reichsman, PhD
Molecules in Motion
Interactive Molecular Structures
www.moleculesinmotion.com
On May 9, 2005, at 7:07 AM, Paul Pillot wrote:
> 1j46 & 1j47 represent the hmg box portion of SRY protein. They only
> differ by 1 amino-acid, but the mutation causes a change in shape,
> making the protein unable to bend correctly the DNA in order to
> initiate the transcription.
>
> Paul
>
> Frieda Reichsman a écrit :
>
>> Dear Colleagues,
>>
>> I am seeking pdb files to use as paired examples of the effects of a
>> single amino acid substitution on protein structure/function. Ideally
>> I would like to have some examples of substitutions that alter
>> function, and some that have little or no evident functional effect.
>> If both types of substitutions are available for the same protein, so
>> much the better.
>>
>> A good example is normal and sickle cell hemoglobin, but I would like
>> to have somewhere between four and ten different protein examples. I
>> need some that affect binding or enzymatic activity and are located
>> in the binding or active site.
>>
>> Thanks in advance for suggestions on this topic.
>>
>> Frieda
>>
>
>
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