Basic Information
Gene ID 618135
Gene Name SOX1
Full Name Uncharacterized protein
Organism Bos taurus [9913]

Cross Reference
UniProt F1MIK5 UniGene NULL
PDB NULL OMIM NULL
KEGG bta:618135 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSBTAP00000051879 Gene3D G3DSA:1.10.30.10 IPR009071 45 124 3.10e-40 High mobility group box domain
ENSBTAP00000051879 Pfam PF00505 IPR009071 46 114 2.60e-26 High mobility group box domain
ENSBTAP00000051879 Pfam PF12336 IPR022097 115 213 7.10e-14 Transcription factor SOX
ENSBTAP00000051879 ProSiteProfiles PS50118 IPR009071 46 114 0.00e-00 High mobility group box domain
ENSBTAP00000051879 SMART SM00398 IPR009071 45 115 5.00e-30 High mobility group box domain
ENSBTAP00000051879 SUPERFAMILY SSF47095 IPR009071 39 118 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSBTAP00000051879 PF00505 1.5e-26 HMG_box HMG (high mobility group) box
ENSBTAP00000051879 PF12336 2.3e-14 SOXp SOX transcription factor
ENSBTAP00000051879 PF09011 5.5e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSBTAP00000051879 GO:0006351 biological_process transcription, DNA-templated
ENSBTAP00000051879 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSBTAP00000051879 GO:0005634 cellular_component nucleus
ENSBTAP00000051879 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9986 Oryctolagus cuniculus 100349813 8128 Oreochromis niloticus 100691128
10029 Cricetulus griseus 100759815 9555 Papio anubis 101022620
39432 Saimiri boliviensis 101037370 31033 Takifugu rubripes 101073272
8083 Xiphophorus maculatus 102225865 7897 Latimeria chalumnae 102353566
13735 Pelodiscus sinensis 102443720 9031 Gallus gallus 396105
7955 Danio rerio 436756 9598 Pan troglodytes 460869
10116 Rattus norvegicus 499593 69293 Gasterosteus aculeatus ENSGACG00000002889
43179 Ictidomys tridecemlineatus ENSSTOG00000011011 8364 Xenopus tropicalis ENSXETG00000001902
9606 Homo sapiens 6656 9544 Macaca mulatta 696412
28377 Anolis carolinensis ENSACAG00000006346 9646 Ailuropoda melanoleuca ENSAMEG00000011029
9615 Canis familiaris ENSCAFG00000006137 9483 Callithrix jacchus ENSCJAG00000008401
10141 Cavia porcellus ENSCPOG00000022456 9361 Dasypus novemcinctus ENSDNOG00000023758
10020 Dipodomys ordii ENSDORG00000007481 9796 Equus caballus ENSECAG00000010653
9371 Echinops telfairi ENSETEG00000006366 9685 Felis catus ENSFCAG00000029205
9595 Gorilla gorilla ENSGGOG00000027572 8049 Gadus morhua ENSGMOG00000020606
9785 Loxodonta africana ENSLAFG00000030155 9315 Macropus eugenii ENSMEUG00000016617
59463 Myotis lucifugus ENSMLUG00000000946 13616 Monodelphis domestica ENSMODG00000021292
9258 Ornithorhynchus anatinus ENSOANG00000004458 30611 Otolemur garnettii ENSOGAG00000034416
8090 Oryzias latipes ENSORLG00000012110 9813 Procavia capensis ENSPCAG00000009165
9601 Pongo abelii ENSPPYG00000005512 9305 Sarcophilus harrisii ENSSHAG00000007719
9823 Sus scrofa ENSSSCG00000011771 99883 Tetraodon nigroviridis ENSTNIG00000013867
9478 Tarsius syrichta ENSTSYG00000001164 9739 Tursiops truncatus ENSTTRG00000004853

Paralogs
614121