SHRiMP
From Bioinformatics.Org Wiki
| tag | Assembly |
|---|---|
| homepage | http://compbio.cs.toronto.edu/shrimp/ |
| description | Assembles to a reference sequence. Developed with Applied Biosystem's colourspace genomic representation in mind. Authors are Michael Brudno and Stephen Rumble at the University of Toronto. Works with data in letterspace (Roche, Illumina), colourspace (AB) and Helicos space. |
| notes | probcalc gave a 'segmentation fault' on a x86_64-pc-linux-gnu with Roche data. |
