Velvet
From Bioinformatics.Org Wiki
| BioLinux | |
|---|---|
| Homepage | http://www.ebi.ac.uk/~zerbino/velvet/ |
| Source code | https://github.com/dzerbino/velvet |
| Version | 1.0.19 |
| Contact email or mailing list | velvet-users@ebi.ac.uk |
| Tags | Assembly, Denovo |
| License | GPLv2 |
| Packaging status | Ongoing |
| Operating system | Linux |
| Architecture | |
Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454. Need about 20-25X coverage and paired reads. Developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI).
