[BiO BB] looking for a tool for producing intron/exon structures

Ryan Golhar golharam at umdnj.edu
Sun Jun 11 23:15:26 EDT 2006

I have a bit of code using BioPerl to do this.  It generates a .png
file.  I use it on a web page.  I've attached an example png image to
this message.  Let me know if its what you are looking for...


-----Original Message-----
From: bio_bulletin_board-bounces+golharam=umdnj.edu at bioinformatics.org
[mailto:bio_bulletin_board-bounces+golharam=umdnj.edu at bioinformatics.org
] On Behalf Of Weiqun Peng
Sent: Sunday, June 11, 2006 4:20 PM
To: bio_bulletin_board at bioinformatics.org
Subject: [BiO BB] looking for a tool for producing intron/exon


I am looking for a software that can produce a graphic visualization of
the gene model (intron/exon
structure) if I tell it the genomic sequence of the
gene and the CDNA. I need the software to be able to
produce a figure that can be used for publications.
Any pointers are appreciated. I searched through the
archive and could not find any hits. Thanks in

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