[BiO BB] Phylogenetic Distance calculation
skhadar at gmail.com
Thu Feb 15 03:07:00 EST 2007
Have a look at this article :
Baldauf SL: *Phylogeny for the faint of heart: a tutorial.*
*Trends Genet* 2003, *19**:*345-351.
On 2/15/07, Shameer Khadar <skhadar at gmail.com> wrote:
> Can you tell me how you created your Phylogram ?
> Is it using the standard Phylogeny protocol MSA -> SEQBOOT (Value) ->
> ProtDist -> Neighbor - Consensus -> Phylogram / Dendrogram ? If that was the
> case, you will get a picture of evolution based on bootstrap support , but
> not in terms of year.
> PS: I am sorry that your question is not clear to me (may be I didnt get
> what you are looking for :| ).
> NCBS - TIFR
> On 2/14/07, soorya kiran <kiran.soorya at gmail.com> wrote:
> > Good day all,
> > Can anyone tell how can I find evolutionary distance (Year) from a given
> > set
> > of amino acid sequences, provided we have constructed the phylogram ?
> > Thanks in advance.
> > Srijith
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