[Bioclusters] Need NFS with local disk based caching, CODA?

Timothy E. Miller bioclusters@bioinformatics.org
24 Oct 2003 08:59:52 -0400


If you like NFS and want local caching, you are almost 
describing AFS.  Look into OpenAFS at www.openafs.org.

It authenticates via Kerberos but you can define your
directories to be read/write by unauthenticated users.

I'm not using it on my cluster (setting up GPFS describe
by someone else as we speak) but I use it (client side)
for research related software distribution.

-Tim

On Fri, 2003-10-24 at 03:43, Michael.James@csiro.au wrote:
> Our bioinformatic database files are outgrowing
>  the nodes capacity to store them,  (~24Gig).
> 
> Plenty of space on the fileserver but we find
>  that cluster throughput levels off at about 10 nodes
>  when the databases are provided through NFS.
> 
> We need something that provides a network file system
>  but with local caching.   24 Gig will be heaps of space
>  to keep a good selection of the popular databases locally.
> 
> When someone asks for something esoteric or after an update
>  we have a short pause while the information is re-distributed
>  and we are humming again.
> 
> I thought to use CODA
>  but find a whierd mix of doco dating from 1900s
>  and somone contributing modules for current kernels.
> 
> Anyone got any experience with Coda?
> 
> And if it's no good, what are the alternatives?
> 
> What are other clusters using?
> 
> TIA,
> michaelj
-- 
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Timothy E. Miller, PhD, RHCE                  voice:    (336)758-3257
Parallel Computing Systems Administrator        fax:    (336)758-7127
Wake Forest University                         cell:    (336)782-6987
Computer Science, Information Systems, Physics
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