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L

length() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Peptide

Leucine - Class in pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids

A leucine molecule.

Leucine(String, Map) - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids.Leucine

Creates a new instance of the Leucine aminoacid.

lightAmbient - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

lightDiffuse - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

lightPosition - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

lightSpecular - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

LnCurvature - Class in pl.krakow.cmuj.bioinformatics.jellipse

Enables plotting natural logarithm of the radius of the local curvature computed along the whole polypeptide chain.

LnCurvature() - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.LnCurvature

lnradiusofcurvature - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids.Aminoacid

radius of curvature of the pentapeptide in which this aacid is the central one

LnRvsVPlot - Class in pl.krakow.cmuj.bioinformatics.jellipse

LnRvsVPlot(Peptide) - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.LnRvsVPlot

lut1Arr - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.Surface

lut2Arr - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.Surface

lut4Arr - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.Surface

Lysine - Class in pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids

A lysine molecule.

Lysine(String, Map) - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids.Lysine

Creates a new instance of the Lysine aminoacid.