A B C D E F G H I J L M N O P Q R S T U V W X Y Z

T

take() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.ScreenShot

takeAndSaveAs(String) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.ScreenShot

texture - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.Surface

thread - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.jEllipse.NotSoGreedyAnimator

thread - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.jEllipse.QuiteLazyAnimator

thread - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.SwingWorker

thread - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.SwingWorker.ThreadVar

threadVar - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.SwingWorker

Threonine - Class in pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids

A threonine molecule.

Threonine(String, Map) - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids.Threonine

Creates a new instance of the Threonine aminoacid.

titlestr - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.jEllipse

toBeInitialized - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.Surface

toolkit - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.Surface

toRotationMatrix16() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Quaternion

Converts the current quaternion to a rotation matrix with 16 elements.

toRotationMatrix4x4() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Quaternion

Converts the current quaternion to a rotation matrix 4x4.

toRotationMatrix9() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Quaternion

Converts the current quaternion to a rotation matrix with 9 elements.

toShortString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.AbsDeviation

toShortString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.AvgDihedralAngle

toShortString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.Deviation

toShortString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.LnCurvature

toShortString() - Method in interface pl.krakow.cmuj.bioinformatics.jellipse.Plottable

toString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.AbsDeviation

toString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.AvgDihedralAngle

toString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Atom

toString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.Deviation

toString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.LnCurvature

toString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Vector3

toString() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PdbFile

Enables getting whole content of the file stored in the current PdbFile object

toString() - Method in interface pl.krakow.cmuj.bioinformatics.jellipse.Plottable

Tryptophan - Class in pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids

A trytophan molecule.

Tryptophan(String, Map) - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids.Tryptophan

Creates a new instance of the Tryptophan aminoacid.

TYPE_UNKNOWN - Static variable in class pl.krakow.cmuj.bioinformatics.jellipse.FFilter

Tyrosine - Class in pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids

A tyrosine molecule.

Tyrosine(String, Map) - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids.Tyrosine

Creates a new instance of the Tyrosine aminoacid.