A B C D E F G H I J L M N O P Q R S T U V W X Y Z

M

main(String[]) - Static method in class pl.krakow.cmuj.bioinformatics.jellipse.jEllipse

Main routine.

MainFrameResized(ComponentEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.jEllipse

makeLayout() - Method in class pl.krakow.cmuj.bioinformatics.jellipse.jEllipse

Places components in the main window.

mapToSphere(float[], float, float) - Static method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Math3d

Math3d - Class in pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit

Math3d() - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Math3d

Creates a new instance of Math3d and warns that object of this class itself has no use

Matrix4fMulRotationScale(float[], float) - Static method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Math3d

Matrix4fSetRotationFromMatrix3f(float[]) - Static method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Math3d

Matrix4fSetRotationScaleFromMatrix3f(float[]) - Static method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Math3d

maxabsdeviation - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Peptide

maxavgdihedralangle - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Peptide

maxdeviation - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Peptide

maxlnradius - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Peptide

Methionine - Class in pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids

A methionine molecule.

Methionine(String, Map) - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids.Methionine

Creates a new instance of the Methionine aminoacid.

minabsdeviation - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Peptide

minavgdihedralangle - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Peptide

mindeviation - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Peptide

minlnradius - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.Peptide

modelMaxSize - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelXcenter - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelXmax - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelXmin - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelXsize - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelYcenter - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelYmax - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelYmin - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelYsize - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelZcenter - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelZmax - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelZmin - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

modelZsize - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

mouseClicked(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

Dummy implementation, required by interface.

mouseClicked(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

Dummy implementation, required by interface.

mouseDragged(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

Navigation with mouse.

mouseDragged(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

Navigation with mouse.

mouseEntered(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

Dummy implementation, required by interface.

mouseEntered(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

Dummy implementation, required by interface.

mouseExited(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

Dummy implementation, required by interface.

mouseExited(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

Dummy implementation, required by interface.

mouseMoved(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

Dummy implementation, required by interface.

mouseMoved(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

Dummy implementation, required by interface.

mousePressed(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

Save when clicked for dragging (=> rotating) purposes.

mousePressed(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

Save when clicked for dragging (=> rotating) purposes.

mouseReleased(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

Dummy implementation, required by interface.

mouseReleased(MouseEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

Dummy implementation, required by interface.

mouseWheelMoved(MouseWheelEvent) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer.wl

multiply(Quaternion) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Quaternion

Multiplies current quaternion (as left one) with another (as right one).

multiplyMatrix9(float[], float[]) - Static method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Math3d